PDB Entry (4l59)

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Visualizer: MichelaNGLo

PDB ID: 4l59 Resolution: 2.29 Å Exp. Method: X-RAY DIFFRACTION
PMID: 24466405 DOI: 10.1039/C3MD00197K
Protein
Protein Name: Lethal(3)malignant brain tumor-like protein 1
Protein Class: TRANSCRIPTION REGULATOR
Uniprot ID/ACC: Q96JM7 (LMBL3_HUMAN) Organism: Homo sapiens
Gene Symbol: L3MBTL3 Gene ID: 84456
Pocket Descriptors
Volume: 341.888 Depth: 17.8438
Hydrophobicity: 0.78 Drug Score: 0.382664
Pocket Similarity: Calculate
Ligand
Ligand Name:   4-(pyrrolidin-1-yl)-1-{4-[2-(pyrrolidin-1-yl)ethyl]phenyl}piperidine
HET ID:   1VZ PubChem:   71598546
DrugBank:   - ChEMBL:   CHEMBL3134131
Canonical SMILES:   C1CCN(C1)CCc1ccc(cc1)N1CCC(CC1)N1CCCC1
Standard InChI:   InChI=1S/C21H33N3/c1-2-13-22(12-1)16-9-19-5-7-20(8-6-19)24-17-10-21(11-18-24)23-14-3-4-15-23/h5-8,21H,1-4,9-18H2
Molecular Formula:   C21H33N3 Mol. Weight:   327.5068 Heavy Atoms:   24
Charge:   0 Is Chiral:   False logP:   3.3303
HBD:   0 HBA:   3 TPSA:   9.72
#Bonds:   27 #Rotatable Bonds:   5 Shape Complexity:   0.71428573
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
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