PDB Entry (1gvm)

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Visualizer: MichelaNGLo

PDB ID: 1gvm Resolution: 2.8 Å Exp. Method: X-RAY DIFFRACTION
PMID: 12139941 DOI: 10.1016/S0022-2836(02)00596-X
Protein
Protein Name: Autolysin
Protein Class: HYDROLASE
Uniprot ID/ACC: P06653 (ALYS_STRPN) Organism: Streptococcus pneumoniae serotype 4
Gene Symbol: - Gene ID: 45652842
Pocket Descriptors
Volume: 42.624 Depth: 8.46901
Hydrophobicity: 0.84375 Drug Score: 0.12672
Pocket Similarity: Calculate
Ligand
Ligand Name:   DECYLAMINE-N,N-DIMETHYL-N-OXIDE
HET ID:   DDQ PubChem:   62452
DrugBank:   DB02613 ChEMBL:   CHEMBL1232157
Canonical SMILES:   CCCCCCCCCC[N+](C)(C)[O-]
Standard InChI:   InChI=1S/C12H27NO/c1-4-5-6-7-8-9-10-11-12-13(2,3)14/h4-12H2,1-3H3
Molecular Formula:   C12H27NO Mol. Weight:   201.34888 Heavy Atoms:   14
Charge:   0 Is Chiral:   False logP:   3.7222
HBD:   0 HBA:   1 TPSA:   29.43
#Bonds:   13 #Rotatable Bonds:   9 Shape Complexity:   1.0
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-