PDB Entry (4r7b)

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Visualizer: MichelaNGLo

PDB ID: 4r7b Resolution: 2.01 Å Exp. Method: X-RAY DIFFRACTION
PMID: 25781969 DOI: 10.1371/journal.pone.0120467
Protein
Protein Name: Choline kinase
Protein Class: TRANSFERASE
Uniprot ID/ACC: Q8DPI4 (Q8DPI4_STRR6) Organism: Streptococcus pneumoniae
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 1509.7 Depth: 31.3605
Hydrophobicity: 0.688482 Drug Score: 0.987058
Pocket Similarity: Calculate
Ligand
Ligand Name:   CHOLINE ION
HET ID:   CHT PubChem:   305
DrugBank:   DB00122 ChEMBL:   CHEMBL920
Canonical SMILES:   OCC[N+](C)(C)C
Standard InChI:   InChI=1S/C5H14NO/c1-6(2,3)4-5-7/h7H,4-5H2,1-3H3/q+1
Molecular Formula:   C5H14NO+ Mol. Weight:   104.17076 Heavy Atoms:   7
Charge:   1 Is Chiral:   False logP:   -0.3151
HBD:   1 HBA:   1 TPSA:   20.23
#Bonds:   6 #Rotatable Bonds:   2 Shape Complexity:   1.0
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
-