PDB Entry (4i9j) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 4i9j | Resolution: 1.85 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 23576432 | DOI: 10.1074/jbc.M113.466532 | |
Protein |
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Protein Name: 1-phosphatidylinositol phosphodiesterase | |
Protein Class: HYDROLASE | |
Uniprot ID/ACC: P45723 (PLC_STAAE) | Organism: Staphylococcus aureus |
Gene Symbol: - | Gene ID: - |
Pocket Descriptors | |
Volume: 335.296 | Depth: 17.2418 |
Hydrophobicity: 0.787234 | Drug Score: 0.201413 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: (4S,7R)-7-(heptanoyloxy)-4-hydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphahexadecan-1-aminium 4-oxide | ||
HET ID: XP5 | PubChem: 193376 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: CCCC(=O)O[C@@H](CO[P@@](=O)(OCC[N+](C)(C)C)O)COC(=O)CCC | ||
Standard InChI: InChI=1S/C16H32NO8P/c1-6-8-15(18)22-12-14(25-16(19)9-7-2)13-24-26(20,21)23-11-10-17(3,4)5/h14H,6-13H2,1-5H3/p+1/t14-/m1/s1 | ||
Molecular Formula: C16H33NO8P+ | Mol. Weight: 398.40887 | Heavy Atoms: 26 |
Charge: 1 | Is Chiral: True | logP: 1.8814 |
HBD: 1 | HBA: 8 | TPSA: 118.17 |
#Bonds: 26 | #Rotatable Bonds: 16 | Shape Complexity: 0.875 |
Stereocomplexity: 0.125 | Ligand Type: Small Molecule |
Binding Affinity |
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