PDB Entry (4da5) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 4da5 | Resolution: 2.4 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 23416529 | DOI: 10.1016/j.bbapap.2013.02.008 | |
Protein |
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Protein Name: Choline kinase alpha | |
Protein Class: TRANSFERASE | |
Uniprot ID/ACC: P35790 (CHKA_HUMAN) | Organism: Homo sapiens |
Gene Symbol: CHKA | Gene ID: 1119 |
Pocket Descriptors | |
Volume: 106.752 | Depth: 10.895 |
Hydrophobicity: 0.767857 | Drug Score: 0.161562 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: (3R)-1-azabicyclo[2.2.2]oct-3-yl[bis(5-chlorothiophen-2-yl)]methanol | ||
HET ID: 0H7 | PubChem: 1166471 | |
DrugBank: - | ChEMBL: - | |
Canonical SMILES: OC(c1ccc(s1)Cl)(c1ccc(s1)Cl)[C@H]1CN2CCC1CC2 | ||
Standard InChI: InChI=1S/C16H17Cl2NOS2/c17-14-3-1-12(21-14)16(20,13-2-4-15(18)22-13)11-9-19-7-5-10(11)6-8-19/h1-4,10-11,20H,5-9H2/t11-/m0/s1 | ||
Molecular Formula: C16H17Cl2NOS2 | Mol. Weight: 374.34827 | Heavy Atoms: 22 |
Charge: 0 | Is Chiral: True | logP: 4.632 |
HBD: 1 | HBA: 4 | TPSA: 79.95 |
#Bonds: 26 | #Rotatable Bonds: 3 | Shape Complexity: 0.5 |
Stereocomplexity: 0.1875 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 360 nM |
Binding MOAD | Ki : 360 nM |