PDB Entry (5eqp) Download |
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Visualizer: MichelaNGLo |
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PDB ID: 5eqp | Resolution: 2.35 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 26700752 | DOI: 10.1021/acs.jmedchem.5b01552 | |
Protein |
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Protein Name: Choline kinase alpha | |
Protein Class: TRANSFERASE | |
Uniprot ID/ACC: P35790 (CHKA_HUMAN) | Organism: Homo sapiens |
Gene Symbol: CHKA | Gene ID: 1119 |
Pocket Descriptors | |
Volume: 146.112 | Depth: 12.2636 |
Hydrophobicity: 0.769231 | Drug Score: 0.0747214 |
Pocket Similarity: Calculate |
Ligand |
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Ligand Name: 6-[(4-methyl-1,4-diazepan-1-yl)methyl]quinoline | ||
HET ID: 5R9 | PubChem: 102596393 | |
DrugBank: - | ChEMBL: CHEMBL3765077 | |
Canonical SMILES: CN1CCCN(CC1)Cc1ccc2c(c1)cccn2 | ||
Standard InChI: InChI=1S/C16H21N3/c1-18-8-3-9-19(11-10-18)13-14-5-6-16-15(12-14)4-2-7-17-16/h2,4-7,12H,3,8-11,13H2,1H3 | ||
Molecular Formula: C16H21N3 | Mol. Weight: 255.35805 | Heavy Atoms: 19 |
Charge: 0 | Is Chiral: False | logP: 2.2481 |
HBD: 0 | HBA: 3 | TPSA: 19.37 |
#Bonds: 21 | #Rotatable Bonds: 2 | Shape Complexity: 0.4375 |
Stereocomplexity: 0.0 | Ligand Type: Small Molecule |
Binding Affinity |
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Database Name | Value |
BindingDB | Kd : 4000 nM, Kd : 3900 nM |
Binding MOAD | IC50 : 3900 nM |