PDB Entry (4mvc)

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Visualizer: MichelaNGLo

PDB ID: 4mvc Resolution: 3.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: 24275660 DOI: 10.1074/jbc.M113.526970
Protein
Protein Name: Choline-phosphate cytidylyltransferase A
Protein Class: TRANSFERASE
Uniprot ID/ACC: P19836 (PCY1A_RAT) Organism: Rattus norvegicus
Gene Symbol: Pcyt1a Gene ID: 140544
Pocket Descriptors
Volume: 985.92 Depth: 20.8423
Hydrophobicity: 0.700855 Drug Score: 0.80051
Pocket Similarity: Calculate
Ligand
Ligand Name:   [2-CYTIDYLATE-O'-PHOSPHONYLOXYL]-ETHYL-TRIMETHYL-AMMONIUM
HET ID:   CDC PubChem:   11583971, 13804, 76963096
DrugBank:   DB04290 ChEMBL:   CHEMBL1231700
Canonical SMILES:   O[C@@H]1[C@@H](CO[P@@](=O)(OP(=O)(OCC[N+](C)(C)C)[O-])O)O[C@H]([C@@H]1O)n1ccc(nc1=O)N
Standard InChI:   InChI=1S/C14H26N4O11P2/c1-18(2,3)6-7-26-30(22,23)29-31(24,25)27-8-9-11(19)12(20)13(28-9)17-5-4-10(15)16-14(17)21/h4-5,9,11-13,19-20H,6-8H2,1-3H3,(H3-,15,16,21,22,23,24,25)/t9-,11-,12-,13-/m1/s1
Molecular Formula:   C14H26N4O11P2 Mol. Weight:   488.32397 Heavy Atoms:   31
Charge:   0 Is Chiral:   True logP:   -0.5791
HBD:   4 HBA:   14 TPSA:   235.34
#Bonds:   36 #Rotatable Bonds:   10 Shape Complexity:   0.71428573
Stereocomplexity:   0.42857143 Ligand Type:   Small Molecule
Binding Affinity
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