PDB Entry (2byq)

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Visualizer: MichelaNGLo

PDB ID: 2byq Resolution: 3.4 Å Exp. Method: X-RAY DIFFRACTION
PMID: 16193063 DOI: 10.1038/sj.emboj.7600828
Protein
Protein Name: Soluble acetylcholine receptor
Protein Class: SIGNALING PROTEIN
Uniprot ID/ACC: Q8WSF8 (Q8WSF8_APLCA) Organism: Aplysia californica
Gene Symbol: - Gene ID: 100533247
Pocket Descriptors
Volume: 478.848 Depth: 27.4169
Hydrophobicity: 0.659664 Drug Score: 0.0268408
Pocket Similarity: Calculate
Ligand
Ligand Name:   EPIBATIDINE
HET ID:   EPJ PubChem:   854023
DrugBank:   DB07720 ChEMBL:   CHEMBL298826
Canonical SMILES:   Clc1ccc(cn1)[C@H]1C[C@H]2N[C@@H]1CC2
Standard InChI:   InChI=1S/C11H13ClN2/c12-11-4-1-7(6-13-11)9-5-8-2-3-10(9)14-8/h1,4,6,8-10,14H,2-3,5H2/t8-,9+,10+/m0/s1
Molecular Formula:   C11H13ClN2 Mol. Weight:   208.68732 Heavy Atoms:   14
Charge:   0 Is Chiral:   True logP:   2.6717
HBD:   1 HBA:   2 TPSA:   24.92
#Bonds:   19 #Rotatable Bonds:   1 Shape Complexity:   0.54545456
Stereocomplexity:   0.27272728 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
BindingDB Ki : 7.400000095367432 nM, Ki : 1 nM