PDB Entry (2y56)

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Visualizer: MichelaNGLo

PDB ID: 2y56 Resolution: 3.59 Å Exp. Method: X-RAY DIFFRACTION
PMID: 21322593 DOI: 10.1021/ja110571r
Protein
Protein Name: Soluble acetylcholine receptor
Protein Class: SIGNALING PROTEIN
Uniprot ID/ACC: Q8WSF8 (Q8WSF8_APLCA) Organism: Aplysia californica
Gene Symbol: - Gene ID: 100533247
Pocket Descriptors
Volume: 373.76 Depth: 23.9365
Hydrophobicity: 0.698198 Drug Score: 0.0138569
Pocket Similarity: Calculate
Ligand
Ligand Name:   [(1S,5R)-8-[(2R)-2-HYDROXY-2-PHENYL-ETHYL]-8-AZABICYCLO[3.2.1]OCTAN-3-YL] BENZOATE
HET ID:   V11 PubChem:   53245678
DrugBank:   - ChEMBL:   CHEMBL1947058
Canonical SMILES:   O[C@H](c1ccccc1)CN1[C@@H]2CC[C@H]1C[C@H](C2)OC(=O)c1ccccc1
Standard InChI:   InChI=1S/C22H25NO3/c24-21(16-7-3-1-4-8-16)15-23-18-11-12-19(23)14-20(13-18)26-22(25)17-9-5-2-6-10-17/h1-10,18-21,24H,11-15H2/t18-,19+,20+,21-/m0/s1
Molecular Formula:   C22H25NO3 Mol. Weight:   351.4388 Heavy Atoms:   26
Charge:   0 Is Chiral:   True logP:   3.5103
HBD:   1 HBA:   4 TPSA:   49.77
#Bonds:   33 #Rotatable Bonds:   6 Shape Complexity:   0.4090909
Stereocomplexity:   0.18181819 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Kd : 310 nM
BindingDB Ki : 100 nM