PDB Entry (2y57)

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Visualizer: MichelaNGLo

PDB ID: 2y57 Resolution: 3.3 Å Exp. Method: X-RAY DIFFRACTION
PMID: 21322593 DOI: 10.1021/ja110571r
Protein
Protein Name: Soluble acetylcholine receptor
Protein Class: SIGNALING PROTEIN
Uniprot ID/ACC: Q8WSF8 (Q8WSF8_APLCA) Organism: Aplysia californica
Gene Symbol: - Gene ID: 100533247
Pocket Descriptors
Volume: 569.408 Depth: 34.0241
Hydrophobicity: 0.677632 Drug Score: 0.0956844
Pocket Similarity: Calculate
Ligand
Ligand Name:   [(1R,5S)-8-PHENETHYL-8-AZABICYCLO[3.2.1]OCTAN-3-YL] BENZOATE
HET ID:   V37 PubChem:   53245679
DrugBank:   - ChEMBL:   CHEMBL1947053
Canonical SMILES:   O=C(c1ccccc1)O[C@@H]1C[C@@H]2CC[C@H](C1)N2CCc1ccccc1
Standard InChI:   InChI=1S/C22H25NO2/c24-22(18-9-5-2-6-10-18)25-21-15-19-11-12-20(16-21)23(19)14-13-17-7-3-1-4-8-17/h1-10,19-21H,11-16H2/t19-,20+,21+
Molecular Formula:   C22H25NO2 Mol. Weight:   335.4394 Heavy Atoms:   25
Charge:   0 Is Chiral:   True logP:   4.0194
HBD:   0 HBA:   3 TPSA:   29.54
#Bonds:   31 #Rotatable Bonds:   6 Shape Complexity:   0.4090909
Stereocomplexity:   0.13636364 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Kd : 130 nM
BindingDB Ki : 31.6200008392334 nM