PDB Entry (3u8l)

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Visualizer: MichelaNGLo

PDB ID: 3u8l Resolution: 2.32 Å Exp. Method: X-RAY DIFFRACTION
PMID: 22170047 DOI: 10.1074/jbc.M111.292243
Protein
Protein Name: Acetylcholine-binding protein
Protein Class: SIGNALING PROTEIN
Uniprot ID/ACC: P58154 (ACHP_LYMST) Organism: Lymnaea stagnalis
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 100.032 Depth: 10.7411
Hydrophobicity: 0.805556 Drug Score: 0.591797
Pocket Similarity: Calculate
Ligand
Ligand Name:   1-(5-phenylpyridin-3-yl)-1,4-diazepane
HET ID:   09Q PubChem:   10777277
DrugBank:   - ChEMBL:   CHEMBL303889
Canonical SMILES:   N1CCCN(CC1)c1cncc(c1)c1ccccc1
Standard InChI:   InChI=1S/C16H19N3/c1-2-5-14(6-3-1)15-11-16(13-18-12-15)19-9-4-7-17-8-10-19/h1-3,5-6,11-13,17H,4,7-10H2
Molecular Formula:   C16H19N3 Mol. Weight:   253.34216 Heavy Atoms:   19
Charge:   0 Is Chiral:   False logP:   2.9421
HBD:   1 HBA:   3 TPSA:   28.16
#Bonds:   21 #Rotatable Bonds:   2 Shape Complexity:   0.3125
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
PDBBind Ki : 8.899999618530273 nM
BindingDB Ki : 8.899999618530273 nM