PDB Entry (4um3)

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Visualizer: MichelaNGLo

PDB ID: 4um3 Resolution: 2.7 Å Exp. Method: X-RAY DIFFRACTION
PMID: 26180047 DOI: 10.1124/mol.115.098061
Protein
Protein Name: Acetylcholine-binding protein
Protein Class: SIGNALING PROTEIN
Uniprot ID/ACC: P58154 (ACHP_LYMST) Organism: Lymnaea stagnalis
Gene Symbol: - Gene ID: -
Pocket Descriptors
Volume: 19.136 Depth: 14.0318
Hydrophobicity: 0.741573 Drug Score: 0.202431
Pocket Similarity: Calculate
Ligand
Ligand Name:   1-(6-bromopyridin-3-yl)-1,4-diazepane
HET ID:   09R PubChem:   10131290
DrugBank:   - ChEMBL:   CHEMBL306387
Canonical SMILES:   Brc1ccc(cn1)N1CCNCCC1
Standard InChI:   InChI=1S/C10H14BrN3/c11-10-3-2-9(8-13-10)14-6-1-4-12-5-7-14/h2-3,8,12H,1,4-7H2
Molecular Formula:   C10H14BrN3 Mol. Weight:   256.14227 Heavy Atoms:   14
Charge:   0 Is Chiral:   False logP:   2.0376
HBD:   1 HBA:   3 TPSA:   28.16
#Bonds:   15 #Rotatable Bonds:   1 Shape Complexity:   0.5
Stereocomplexity:   0.0 Ligand Type:   Small Molecule
Binding Affinity
Database Name Value
BindingDB Ki : 1.2999999523162842 nM