PDB Entry (6akx)

Download

Visualizer: MichelaNGLo

PDB ID: 6akx Resolution: 2.8 Å Exp. Method: X-RAY DIFFRACTION
PMID: 30234300 DOI: 10.1021/acs.jmedchem.8b01077
Protein
Protein Name: C-C chemokine receptor type 5
Protein Class: SIGNALING PROTEIN
Uniprot ID/ACC: P51681 (CCR5_HUMAN) Organism: Homo sapiens
Gene Symbol: CCR5 Gene ID: 1234
Pocket Descriptors
Volume: 767.232 Depth: 32.2523
Hydrophobicity: 0.721254 Drug Score: 0.51918
Pocket Similarity: Calculate
Ligand
Ligand Name:   N-[(1S)-3-{(3-exo)-3-[3-methyl-5-(propan-2-yl)-4H-1,2,4-triazol-4-yl]-8-azabicyclo[3.2.1]octan-8-yl}-1-(thiophen-2-yl)propyl]cyclopentanecarboxamide
HET ID:   A4R PubChem:   122668190
DrugBank:   - ChEMBL:   CHEMBL4238063
Canonical SMILES:   O=C(C1CCCC1)N[C@H](c1cccs1)CCN1[C@@H]2CC[C@H]1C[C@@H](C2)n1c(C)nnc1C(C)C
Standard InChI:   InChI=1S/C26H39N5OS/c1-17(2)25-29-28-18(3)31(25)22-15-20-10-11-21(16-22)30(20)13-12-23(24-9-6-14-33-24)27-26(32)19-7-4-5-8-19/h6,9,14,17,19-23H,4-5,7-8,10-13,15-16H2,1-3H3,(H,27,32)/t20-,21+,22-,23-/m0/s1
Molecular Formula:   C26H39N5OS Mol. Weight:   469.68576 Heavy Atoms:   33
Charge:   0 Is Chiral:   True logP:   5.7059
HBD:   1 HBA:   7 TPSA:   91.29
#Bonds:   41 #Rotatable Bonds:   9 Shape Complexity:   0.7307692
Stereocomplexity:   0.15384616 Ligand Type:   Small Molecule
Binding Affinity
-