Index Ligand Name Ligand ID Canonical SMILES #Protein-Ligand Complex(es) 1 1,2-epoxy-3-(p-nitrophenoxy)propane COVPDB766 [O-][N+](=O)c1ccc(cc1)OC[C@H]2CO2 1 2 1,2-epoxyhexane COVPDB357 CCCC[C@H]1CO1 2 3 1,2-Epoxyoctane COVPDB354 CCCCCC[C@H]1CO1 3 4 14,15-EET COVPDB751 CCCCC[C@H]1O[C@@H]1C\C=C/C\C=C\C\C=C/CCCC(O)=O 1 5 (±)14,15-epoxy-5Z,8Z,11Z,17Z-eicosatetraenoic acid COVPDB371 CC\C=C/C[C@H]1O[C@@H]1C\C=C/C\C=C/C\C=C/CCCC(O)=O 1 6 16,17-epoxy-4Z,7Z,10Z,13Z,19Z-docosapentaenoic acid COVPDB353 CC\C=C/C[C@H]1O[C@@H]1C\C=C/C\C=C/C\C=C/C\C=C/CCC(O)=O 1 7 (±)17,18-epoxy-5Z,8Z,11Z,14Z-eicosatetraenoic acid COVPDB372 CC[C@H]1O[C@@H]1C\C=C/C\C=C/C\C=C/C\C=C/CCCC(O)=O 1 8 (±)19,20-epoxy-4Z,7Z,10Z,13Z,16Z-docosapentaenoic acid COVPDB363 CC[C@H]1O[C@@H]1C\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CCC(O)=O 1 9 (1R,2R)-1,2-Epoxycyclohexane COVPDB212 [C@H]12[C@H](O2)CCCC1 1 10 2,3- epoxypropyl-alpha-D-glucopyranoside COVPDB765 C1O[C@H]1CO[C@@H]2[C@H](O)[C@@H](O)[C@H](O)[C@H](O2)CO 2 11 2,3-EPOXYPROPYL-BETA-D-XYLOSIDE COVPDB606 C1O[C@H]1CO[C@H]2[C@H](O)[C@@H](O)[C@@H](CO2)O 1 12 (2S,3R,4S,5R)-2-{[(1R,3R,4R,5R,6S)-4,5-dihydroxy-7-oxabicyclo[4.1.0]heptan-3-yl]oxy}oxane-3,4,5-triol COVPDB917 O[C@@H]1CO[C@H]([C@H](O)[C@H]1O)O[C@H](C[C@@H](O2)[C@@H]23)[C@H](O)[C@H]3O 2 13 (2S,3S)-2-(6-methoxynaphthalen-2-yl)-3-methyloxirane COVPDB161 COc(c1)ccc(c12)cc(cc2)[C@@H]3O[C@H]3C 1 14 3,4-Epoxybutyl beta-D-Cellobioside COVPDB949 OC[C@H]1O[C@H]([C@H](O)[C@@H](O)[C@@H]1O)C[C@@H]2[C@@H](CO)O[C@H]([C@H](O)[C@H]2O)OCC[C@H]3CO3 1 15 3,4‐epoxybutyl‐beta‐D‐xyloside COVPDB10 O[C@@H]1CO[C@H]([C@H](O)[C@H]1O)OCC[C@@H]2CO2 1 16 (3S,5R,7R,8S)-5,7,8-Trihydroxy-1-oxaspiro[2.5]octane-5-carboxylic acid COVPDB1456 O[C@@H]1C[C@@](O)(C[C@]2(CO2)[C@H]1O)C(O)=O 2 17 (3S,7R,8S)-7,8-dihydroxy-1-oxaspiro[2.5]octane-5-carboxylic acid COVPDB810 O[C@@H]1C[C@H](C[C@]2(CO2)[C@H]1O)C(O)=O 2 18 4,5-EPOXYPENTYL-BETA-D-XYLOSIDE COVPDB611 C1O[C@@H]1CCCO[C@H]2[C@H](O)[C@@H](O)[C@@H](CO2)O 1 19 (4R,7R)-3-[(4-methoxyphenyl)methyl]-3,5,6,7-tetrahydrospiro[1,2,3-benzotriazole-4,2'-oxiran]-7-yl N-(propan-2-yl)carbamate COVPDB246 COc1ccc(cc1)Cn2nnc(c2[C@]34CO3)[C@@H](CC4)OC(=O)NC(C)C 1 20 (4R,7S)-3-[(4-methoxyphenyl)methyl]-3,5,6,7-tetrahydrospiro[1,2,3-benzotriazole-4,2'-oxiran]-7-yl N-(propan-2-yl)carbamate COVPDB249 COc1ccc(cc1)Cn2nnc(c2[C@]34CO3)[C@H](CC4)OC(=O)NC(C)C 1 21 (4S)-4-{[(benzyloxy)carbonyl]amino}-4-{[(1S)-1-[N'-(carboxymethyl)-N'-[(2S,3S)-3-[(2-phenylethyl)carbamoyl]oxirane-2-carbonyl]hydrazinecarbonyl]-2-methylpropyl]carbamoyl}butanoic acid COVPDB1085 CC(C)[C@H](NC(=O)[C@H](CCC(O)=O)NC(=O)OCc1ccccc1)C(=O)NN(CC(O)=O)C(=O)[C@H]1O[C@@H]1C(=O)NCCc1ccccc1 1 22 (4S,7R)-3-[(4-methoxyphenyl)methyl]-3,5,6,7-tetrahydrospiro[1,2,3-benzotriazole-4,2'-oxiran]-7-yl N-(propan-2-yl)carbamate COVPDB425 COc1ccc(cc1)Cn2nnc(c2[C@@]34CO3)[C@@H](CC4)OC(=O)NC(C)C 1 23 4-Vinyl-1-cyclohexene 1,2-epoxide COVPDB401 C=C[C@@H](C1)CC[C@H](O2)[C@H]12 4 24 alpha-EBG COVPDB746 C1O[C@H]1CCO[C@@H]2[C@H](O)[C@@H](O)[C@H](O)[C@H](O2)CO 3 25 B-CA059 COVPDB252 CCOC(=O)[C@H]1O[C@@H]1C(=O)N[C@@H]([C@@H](C)CC)C(O)=O 1 26 CA073 COVPDB343 CCCNC(=O)[C@@H]1[C@H](O1)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N2CCC[C@H]2C(=O)OCc3ccccc3 2 27 CA074 COVPDB9 CCCNC(=O)[C@@H]1O[C@H]1C(=O)N[C@@H]([C@@H](C)CC)C(=O)N1CCC[C@H]1C(O)=O 3 28 CA075 COVPDB344 CCOC(=O)[C@H]1O[C@@H]1C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](C)C(O)=O 1 29 CA076 COVPDB345 CCOC(=O)[C@H]1O[C@@H]1C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H]([C@@H](C)CC)C(O)=O 1 30 CA077 COVPDB346 c1ccccc1CNC(=O)[C@H]2O[C@@H]2C(=O)N[C@@H]([C@@H](C)CC)C(=O)N3CCC[C@H]3C(=O)OCc4ccccc4 1 31 carfilzomib COVPDB181 c1ccccc1C[C@@H](C(=O)N[C@@H](CC(C)C)C(=O)[C@@]2(C)CO2)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCc3ccccc3)NC(=O)CN4CCOCC4 2 32 CBZ-ASP-GLU-VAL-azaASP-EP-CO-N(CH2PH)2 COVPDB1117 CC(C)[C@H](NC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](CC(O)=O)NC(=O)OCc1ccccc1)C(=O)NN(CC(O)=O)C(=O)[C@H]1O[C@@H]1C(=O)N(Cc1ccccc1)Cc1ccccc1 1 33 CBZ-ASP-GLU-VAL-azaASP-EP-CO-NH-CH2PH COVPDB1119 CC(C)[C@H](NC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](CC(O)=O)NC(=O)OCc1ccccc1)C(=O)NN(CC(O)=O)C(=O)[C@H]1O[C@@H]1C(=O)NCc1ccccc1 1 34 CBZ-ASP-GLU-VAL-azaASP-EP-COO-CH2PH COVPDB1118 CC(C)[C@H](NC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](CC(O)=O)NC(=O)OCc1ccccc1)C(=O)NN(CC(O)=O)C(=O)[C@H]1O[C@@H]1C(=O)OCc1ccccc1 1 35 CBZ-ILE-GLU-THR-azaASP-EP-CO-ALA-NH-CH2-PH COVPDB1120 CC[C@H](C)[C@H](NC(=O)OCc1ccccc1)C(=O)N[C@@H](CCC(O)=O)C(=O)N[C@@H]([C@@H](C)O)C(=O)NN(CC(O)=O)C(=O)[C@H]1O[C@@H]1C(=O)N[C@@H](C)C(=O)NCc1ccccc1 1 36 Cbz-Leu-Phe-AGln-EP-COOEt COVPDB519 CCOC(=O)[C@H]1O[C@H]1C(=O)N(CCC(=O)N)NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CC(C)C)NC(=O)OCc3ccccc3 3 37 cerulenin COVPDB98 O=C(N)[C@@H]1O[C@@H]1C(=O)CC/C=C/C/C=C/C 8 38 cis-Stilbene Oxide COVPDB355 c1ccccc1[C@H]2O[C@H]2c3ccccc3 1 39 CLIK148 COVPDB607 c1ccccc1C[C@H](C(=O)N(C)C)NC(=O)[C@H]2O[C@@H]2C(=O)NCCc3ccccn3 1 40 conduritol-beta-epoxide COVPDB627 [C@@H]12[C@H](O2)[C@H](O)[C@@H](O)[C@H](O)[C@H]1O 2 41 cyclophellitol COVPDB1489 [C@H]12[C@H](O1)[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O 1 42 E64 COVPDB739 CC(C)C[C@H](NC(=O)[C@@H]1O[C@H]1C(O)=O)C(=O)NCCCCNC(N)=N 12 43 E-64-C COVPDB741 CC(C)CCNC(=O)[C@H](CC(C)C)NC(=O)[C@@H]1O[C@H]1C(O)=O 3 44 E64d COVPDB742 CCOC(=O)[C@@H]1O[C@H]1C(=O)N[C@@H](CC(C)C)C(=O)NCCC(C)C 1 45 E64-R-P-NH2 COVPDB740 CC(C)C[C@@H](NC(=O)[C@H]1O[C@@H]1C(=O)N[C@@H](CCCNC(N)=N)C(=O)N1CCC[C@H]1C(N)=O)C(=O)NCCCCNC(N)=N 1 46 epibromohydrin COVPDB747 BrC[C@H]1CO1 1 47 EpoY COVPDB567 CCOC(=O)[C@H]1O[C@@H]1C(=O)N[C@@H](Cc1ccc(O)cc1)C(O)=O 2 48 fosfomycin COVPDB793 C[C@@H]1O[C@@H]1P(O)(O)=O 6 49 FUMAGILLIN COVPDB819 CC(C)=CC[C@@H](O1)[C@@]1(C)[C@H]([C@@]23CO3)[C@H](OC)[C@@H](CC2)OC(=O)/C=C/C=C/C=C/C=C/C([O-])=O 1 50 Glucosyl epi-cyclophellitol COVPDB279 OC[C@H]1O[C@@H]([C@H](O)[C@@H](O)[C@@H]1O)O[C@H]([C@H]2CO)[C@H](O)[C@@H](O)[C@H](O3)[C@H]23 1 51 JCP598 COVPDB518 CCOC(=O)[C@H]1O[C@@H]1C(=O)N(CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CC(C)C)NC(=O)OCc2ccccc2 1 52 LU-005i COVPDB180 C1CCCCC1C[C@@H](C(=O)[C@@]2(C)CO2)NC(=O)[C@H](Cc3ccc(cc3)OC)NC(=O)[C@H](C)NC(=O)CN4CCOCC4 1 53 ME569 COVPDB911 c1cccc(c12)C(C)(C)C(\N2C)=C/C=C/C=C/C(C3(C)C)=[N+](c(c34)cccc4)CCCCCC(=O)NCc5cn(nn5)C[C@@H]([C@@H](O6)[C@@H]67)[C@@H](O)[C@H](O)[C@H]7O 1 54 ME655 COVPDB908 [C@H]12[C@@H](O2)[C@H](O)[C@@H](O)[C@H](O)[C@H]1Cn3cc(nn3)CCCOc4ccc(cc4)-c5ccccc5 1 55 ME656 COVPDB1282 [C@H]12[C@@H](O2)[C@H](O)[C@@H](O)[C@H](O)[C@H]1Cn3cc(nn3)CCCOCC45C[C@H]6C[C@@H](C4)C[C@H](C6)C5 1 56 N-[(1S,2R,3R,4R,5R,6R)-3,4-dihydroxy-5-(hydroxymethyl)-7-oxabicyclo[4.1.0]heptan-2-yl]-2,2,2-trifluoroacetamide COVPDB895 OC[C@@H]([C@@H](O1)[C@@H]12)[C@@H](O)[C@H](O)[C@H]2NC(=O)C(F)(F)F 1 57 N-({(2S,3S)-3-[(BENZYLAMINO)CARBONYL]OXIRAN-2-YL}CARBONYL)-L-ISOLEUCYL-L-PROLINE COVPDB348 CC[C@H](C)[C@H](NC(=O)[C@H]1O[C@@H]1C(=O)NCc1ccccc1)C(=O)N1CCC[C@H]1C(O)=O 1 58 N-{[(2S,3S)-3-(ETHOXYCARBONYL)OXIRAN-2-YL]CARBONYL}-L-THREONYL-L-ISOLEUCINE COVPDB6 CCOC(=O)[C@H]1O[C@@H]1C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H]([C@@H](C)CC)C(O)=O 1 59 NS-134 COVPDB764 COC(=O)CNC(=O)CNC(=O)[C@H](CC(C)C)NC(=O)[C@H]1O[C@@H]1C(=O)N[C@@H](CC(C)C)C(=O)N1CCC[C@H]1C(O)=O 1 60 ONX 0914 COVPDB873 c1ccccc1C[C@@H]([C@@H](O2)C2(C)C)NC(=O)[C@H](Cc3ccc(cc3)OC)NC(=O)[C@H](C)NC(=O)CN4CCOCC4 1 61 (R)-Alpha-phenylglycidate COVPDB504 [O-]C(=O)[C@@]1(CO1)c2ccccc2 1 62 R-Glycidol phosphate COVPDB827 OP(O)(=O)OC[C@H]1CO1 2 63 Styrene oxide COVPDB789 C1O[C@@H]1c2ccccc2 3 64 taccalonolide AJ COVPDB1376 O1[C@H]([C@]123)[C@@H](C)[C@H]4[C@H]([C@@]2(C)[C@](C(O3)=O)(C)O)[C@H](O)[C@H]5[C@H]6[C@H]([C@H](OC(=O)C)[C@@H]([C@]45C)OC(=O)C)[C@]7(C)[C@@H](C(=O)[C@@H]6O)C[C@H]8[C@H](O8)[C@@H]7OC(=O)C 1 65 WR13(R,R) COVPDB1153 CCOC(=O)[C@@H](C)[C@@H](O)C(=O)N[C@@H](CC=C)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(N)=O 1 66 WR18(S,S) COVPDB1152 CCOC(=O)[C@@H]1O[C@@H]1C(=O)N[C@@H](CCC#N)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(N)=O 1 67 WRR-112 COVPDB1283 CC(C)CCNC(=O)[C@H](CCc1ccccc1)NC(=O)[C@H]1O[C@@H]1C(O)=O 1 68 WRR-99 COVPDB1274 CC(C)CCNC(=O)[C@@H](CCc1ccccc1)NC(=O)[C@H]1O[C@@H]1C(O)=O 1 69 ZEN-3219 COVPDB809 Cc1noc(C)c1-c2cn(c(=O)cc2)Cc3ccc(cc3)[C@H]4CO4 1