PDB Entry (4i9b) |
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PDB ID: 4i9b | Resolution: 1.9 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 23408433 | DOI: 10.1074/jbc.M112.443952 | |
Protein |
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Protein Name: Putative betaine aldehyde dehyrogenase | |
Uniprot ID/ACC: Q56R04 (Q56R04_SOLLC) | Organism: Solanum lycopersicum (Tomato) (Lycopersicon esculentum) |
Gene Symbol: 101253497 | Gene ID: 101253497 |
Protein Class: OXIDOREDUCTASE |
Ligand |
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Ligand Name: (2-hydroxyethoxy)acetaldehyde | ||
Canonical SMILES: OCCOCC=O | ||
Standard InChI: InChI=1S/C4H8O3/c5-1-3-7-4-2-6/h1,6H,2-4H2 | ||
HET Code: 1KA | PubChem: 176960 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C4H8O3 | Mol. Weight: 104.04734 | logP: -0.8058 |
HBD: 1 | HBA: 3 | |
#Rotatable Bonds: 4 | TPSA: 46.53 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | CYS 295 | A | 22.75 | 13.45 | Aldehyde |
Binding Affinity |
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