PDB Entry (4i9b)
PDB ID: 4i9b Resolution: 1.9 Å Exp. Method: X-RAY DIFFRACTION
PMID: 23408433 DOI: 10.1074/jbc.M112.443952
Protein
Protein Name: Putative betaine aldehyde dehyrogenase
Uniprot ID/ACC: Q56R04 (Q56R04_SOLLC) Organism: Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Gene Symbol: 101253497 Gene ID: 101253497
Protein Class: OXIDOREDUCTASE
Ligand
Ligand Name:   (2-hydroxyethoxy)acetaldehyde
Canonical SMILES:   OCCOCC=O
Standard InChI:   InChI=1S/C4H8O3/c5-1-3-7-4-2-6/h1,6H,2-4H2
HET Code:   1KA PubChem:   176960
DrugBank:   - ChEMBL:   -
Molecular Formula:   C4H8O3 Mol. Weight:   104.04734 logP:   -0.8058
HBD:   1 HBA:   3
#Rotatable Bonds:   4 TPSA:   46.53
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Hemi(thio)acetalization CYS 295 A 22.75 13.45 Aldehyde
Binding Affinity
-