PDB Entry (3s3j)
PDB ID: 3s3j Resolution: 2.25 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Protein-glutamine gamma-glutamyltransferase 2
Uniprot ID/ACC: P21980 (TGM2_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: TGM2 Gene ID: 7052
Protein Class: TRANSFERASE
Ligand
Ligand Name:   N-[(benzyloxy)carbonyl]-6-diazonio-5-oxo-L-norleucyl-L-valyl-L-prolyl-L-leucine
Canonical SMILES:   CC(C)C[C@H](NC(=O)[C@@H]1CCCN1C(=O)[C@@H](NC(=O)[C@H](CCC(=O)C=[N+]=[N-])NC(=O)OCc1ccccc1)C(C)C)C(O)=O
Standard InChI:   InChI=1S/C30H42N6O8/c1-18(2)15-23(29(41)42)33-27(39)24-11-8-14-36(24)28(40)25(19(3)4)35-26(38)22(13-12-21(37)16-32-31)34-30(43)44-17-20-9-6-5-7-10-20/h5-7,9-10,16,18-19,22-25H,8,11-15,17H2,1-4H3,(H,33,39)(H,34,43)(H,35,38)(H,41,42)/t22-,23-,24-,25-/m0/s1
HET Code:   02Y PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C30H42N6O8 Mol. Weight:   614.3064 logP:   1.6786
HBD:   4 HBA:   7
#Rotatable Bonds:   16 TPSA:   207.61
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution CYS 277 A 6.14 19.35 Diazomethyl Carbonyl
Binding Affinity
-